Aplikacija za pohranjivanje i vizualizaciju bioinformatičkih podataka

master's thesis

• Title (english): An Application for Visualizing and Storing Bioinformatics Data
• Author: Nikola Osredek
• Mentor: Krešimir Križanović (mentor)
• Committee member: Krešimir Križanović (predsjednik povjerenstva)
• Committee member: Marko Subašić (član povjerenstva)
• Committee member: Igor Mekterović (član povjerenstva)
• Granter: University of Zagreb; Faculty of Electrical Engineering and Computing; Zagreb
• Defense date and country: 2022-07-13, Croatia
• Scientific / art field, discipline and subdiscipline: TECHNICAL SCIENCES; Computing

Abstract

U ovom radu napravljena je aplikacija koja može pohranjivati par vrsti bioinformatičkih podataka. Podaci koji su uključeni su referentni genomi, očitanja iz uređaja za sekvenciranje i mapiranja tih očitanja. Sve podatke se može pretraživati po različitim parametrima te se mapirana očitanja mogu vizualizirati. Aplikacija je napravljena kao web aplikacija koja podržava više korisnika.

Abstract (english)

The result of this paper is a web application for saving a few types of bioinformatic data. Data which is possible to add includes references of genomes, reads from sequencing machines and mappings of those reads. All the data can be searched by different parameters and the mapped reads can be visualized. The application is made as a web application that supports multiple users.

• Keywords: C#; ASP.NET Core; Vue.js; bioinformatika; DNA sekvenciranje; mapiranje
• Keywords (english): C#; ASP.NET Core; Vue.js; bioinformatics; DNA sequencing; mapping
• Language: croatian
• URN:NBN: urn:nbn:hr:168:685290
• Study programme: Title: Computing; Study programme type: university; Study level: graduate; Academic / professional title: magistar/magistra inženjer/inženjerka računarstva (magistar/magistra inženjer/inženjerka računarstva)
• Type of resource: Text
• File origin: Born digital
• Access conditions: Closed access
• Created on: 2023-01-13 15:45:33